Visikol for Plant Biology Publications


Drivers of truffle biomass, community composition, and richness among forest types in the northeastern US. Stephens, R. B., Remick, T. J., Ducey, M. J., & Rowe, R. J. (2017). Fungal Ecology29, 30-41.

Comprehensive study of excess phosphate response reveals ethylene mediated signaling that negatively regulates plant growth and development. Shukla, D., Rinehart, C. A., & Sahi, S. V. (2017). Scientific Reports7.

KNOX Protein OSH15 Induces Grain Shattering by Repressing Lignin Biosynthesis Genes. Yoon, Jinmi, Lae-Hyeon Cho, Htet Wai Antt, Hee-Jong Koh, and Gynheung An. Plant Physiology (2017): pp-00298.

Identification of cyst nematode B-type CLE peptides and modulation of the vascular stem cell pathway for feeding cell formation. Guo, X., Wang, J., Gardner, M., Fukuda, H., Kondo, Y., Etchells, J. P., & Mitchum, M. G. (2017). PLoS Pathogens13(2), e1006142.


Histological Analysis of the Arabidopsis Gynoecium and Ovules Using Chloral Hydrate Clearing and Differential Interference Contrast Light Microscopy. Franks, R. G. (2016).  Oogenesis: Methods and Protocols, 1-7.

Wheat mutant MNR220 delays haustoria formation during leaf rust pathogenesis at the seedling stage. Talajoor, M., Wang, X., Zhang, H., Zhang, P., Bhavani, S., Tabe, L., & Huang, L. (2016).  Canadian Journal of Plant Pathology38(3), 338-347.

Cuticle and subsurface ornamentation of intact plant leaf epidermis under confocal and superresolution microscopy. Urban, M. A., Barclay, R. S., Sivaguru, M., & Punyasena, S. W. (2016).  Microscopy research and technique.

Macro optical projection tomography for large scale 3D imaging of plant structures and gene activity. Lee, K. J., Calder, G. M., Hindle, C. R., Newman, J. L., Robinson, S. N., Avondo, J. J., & Coen, E. S. (2016). Journal of Experimental Botany, erw452.

Functional analysis of diacylglycerol acyltransferase1 genes from Camelina sativa and effects of CsDGAT1B overexpression on seed mass and storage oil content in C. sativa. Kim, H., Park, J. H., Kim, A. Y., & Suh, M. C. (2016). Plant Biotechnology Reports10(3), 141-153.

Semiautomated confocal imaging of fungal pathogenesis on plants: Microscopic analysis of macroscopic specimens. Minker, K. R., Biedrzycki, M. L., Kolagunda, A., Rhein, S., Perina, F. J., Jacobs, S. S., & Balint‐Kurti, P. (2016). Microscopy Research and Technique.

Seeing through musculoskeletal tissues: improving in situ imaging of bone and the lacunar canalicular system through optical clearing. Berke, I. M., Miola, J. P., David, M. A., Smith, M. K., & Price, C. (2016).  PloS one11(3), e0150268.


Improved Methods for Clearing and Staining of Plant Samples. Lux, A., Vaculík, M., & Kováč, J. (2015). In Plant Microtechniques and Protocols (pp. 167-178). Springer International Publishing.

Microscopy for Quality Assessment of Bilberry Fruit (Vaccinium myrtillus L.). Villani, T. S., Patel, H., Zhen, J., Koroch, A. R., & Simon, J. E. (2015).  Journal of Medicinally Active Plants4(1), 8-15.


Ecological relationship between floral thermogenesis and pollination in Nelumbo lutea (Nelumbonaceae). Dieringer, G., Cabrera, R. L., & Mottaleb, M. (2014).American journal of botany101(2), 357-364.

Pyrrole alkaloids with potential cancer chemopreventive activity isolated from a goji berry-contaminated commercial sample of African Mango. Li, J., Pan, L., Naman, C. B., Deng, Y., Chai, H., Keller, W. J., & Kinghorn, A. D. (2014). Journal of agricultural and food chemistry62(22), 5054-5060.


An improved clearing and mounting solution to replace chloral hydrate in microscopic applications. Villani, T. S., Koroch, A. R., & Simon, J. E. (2013). Applications in plant sciences1(5), 1300016.

Rapid staining method to detect and identify downy mildew (Peronospora belbahrii) in basil. Koroch, A. R., Villani, T. S., Pyne, R. M., & Simon, J. E. (2013).